Dynamic pruned-enriched Rosenbluth method
نویسندگان
چکیده
منابع مشابه
Comparative Study of Hydrophobic-Polar and Miyazawa-Jernigan Energy Functions in Protein Folding on a Cubic Lattice Using Pruned-Enriched Rosenbluth Monte Carlo Algorithm
In this analysis of the contact energies guiding the protein folding, the performance of the PERM algorithm on a simple, cubic lattice is examined when Miyazawa-Jernigan (MJ) and Hydrophobic-Polar (HP) energy matrices are applied. Geometric similarity of minimum energy conformations of twenty proteins, generated when HP and MJ are used, is determined by the Root Mean Square Difference (RMSD) an...
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ژورنال
عنوان ژورنال: Molecular Physics
سال: 2003
ISSN: 0026-8976,1362-3028
DOI: 10.1080/0026897031000094461